Dunno if this helps or not man, but here goes my little brain fart...lol...
Ok, open a blank project, insert Kontakt....you'll need to count the outputs you need (kick, oh, snare, etc), & account for mono or stereo...
At the top of the screen in Kontakt, click "output":
Then, you'll need to delete the ouputs you already have, & replace them with new outs:
You'll have to do this twice, so on the second time, un-tick the checkbox to delete the already existing outputs/channels:
I'd go ahead & name the outputs/channels in Kontakt to save confusion (kick, snare, hh, etc)...
Load Studio Drummer....Then in the mixer section, you'll have to set each individual mixer channel to the output you want in Kontakt, by clicking the "Settings" tab on the left, then selecting the channel/output you want to assign that mixer channel to in Kontakt's outputs:
FWIW, I haven't figured out how to route the reverb channel to it's own output, & have no idea how to set up the actual tracks in Pro Tools (I use Reaper), but this should help you, I hope...If you're able to set up the actual tracks in Pro Tools, again, maybe this will help you dude...
Myself, I find Kontakt really frustrating & ass-backwards to use compared to other vsti's like Superior Drummer, but maybe it's just me....
Hope this helps, & good luck!!!!