The other thing to look at is the waveform.
If the notes in question are higher than all the rest, then you can spot them easily and deal with them (however you choose). I recorded a violin part once where all the A notes were sticking out like crazy. I normally don't have that problem, but this time it just wasn't working right. In the end I just went through the track, found them all and manually lowered them.
If all the notes look to be about the same height on the waveform, you may be trying to fix a problem that doesn't exist within the recorded track. For example, wayward notes may be the result of room nodes or maybe peaky monitors. If you try and fix the wave, you may be screwing it up for other listeners.