There is no single program that will do what you want, and no set of programs that will produce anything usable in less time than manual transcription. There are third-party programs that will transcribe an audio track into written notes -- I believe Finale and Sibelius both come with light versions of such software. I suppose you can try to transcribe one instrument part at a time, but you will still have to do considerable manual correction to get it accurate and correctly-notated. Though software like this is pretty good at detecting note pitch, and both Finale and Sibelius are very good at correct spelling of enharmonics, software in general is very bad at accurately detecting note duration.
Any way you look at it, transcription takes time. You're not really going to gain anything by doing it programmatically.