Thanks for the feedback guys...
To answer some of your questions, one mic (AKG C414) was positioned about 5 inches away from the 12th fret, the other (Studio Projects B1) was peeking over the players shoulder from behind, pointing down, so about 14 or 15 inches away from the picking hand, off-axis to the sound hole.
I guess it was pretty 'reverby', I actually scaled that back in the next mix. I tend to get a little carried away with reverb on acoustic parts of metal songs. As to the fan noise, I track in a room about 25 feet away from my control room where the closest PC would be. It could have been breathing or god knows what.
I don't know if you guys will like the rest, it somewhat abrubtly goes all "cookie-monster" vocals and heavy guitars right after the intro...lol. But if you want I will post a link to the working mix of the full song.